Index

A

atlases (fmristroke.config.workflow attribute)

B

bids_dir (fmristroke.config.execution attribute)

bids_filters (fmristroke.config.execution attribute) boilerplate_only (fmristroke.config.execution attribute)

C

conn_measure (fmristroke.config.workflow attribute) cpu_count (fmristroke.config.environment attribute)

crashfile_format (fmristroke.config.nipype attribute) croprun (fmristroke.config.workflow attribute)

D

dumps() (in module fmristroke.config)

E

environment (class in fmristroke.config)

exec_env (fmristroke.config.environment attribute) execution (class in fmristroke.config)

F

fmriprep_dir (fmristroke.config.execution attribute) fmriprep_version (fmristroke.config.environment attribute) fmristroke.config module fmristroke.workflows.bold module fmristroke.workflows.bold.base module fmristroke.workflows.bold.concatenate module fmristroke.workflows.bold.confounds module

fmristroke.workflows.bold.connectivity module fmristroke.workflows.bold.denoise module fmristroke.workflows.bold.lagmaps module fmristroke.workflows.bold.registration module fmristroke.workflows.final module free_mem (fmristroke.config.environment attribute) freesurfer (fmristroke.config.workflow attribute) from_dict() (in module fmristroke.config)

G

get() (in module fmristroke.config)

get_linked_libs (fmristroke.config.nipype attribute) get_plugin() (fmristroke.config.nipype class method)

I

ica_method (fmristroke.config.workflow attribute) init() (fmristroke.config.execution class method) (fmristroke.config.nipype class method) init_concat_wf() (in module fmristroke.workflows.bold.concatenate) init_confs_wf() (in module fmristroke.workflows.bold.confounds) init_connectivity_wf() (in module fmristroke.workflows.bold.connectivity) init_denoise_wf() (in module fmristroke.workflows.bold.denoise)

init_fmristroke_wf() (in module fmristroke.workflows.final) init_func_lesion_derivatives_wf() (in module fmristroke.workflows.bold.base) init_hemodynamic_wf() (in module fmristroke.workflows.bold.lagmaps) init_lesion_preproc_wf() (in module fmristroke.workflows.bold.base) init_lesionplot_wf() (in module fmristroke.workflows.bold.registration) init_single_subject_wf() (in module fmristroke.workflows.final) init_spaces() (in module fmristroke.config)

L

layout (fmristroke.config.execution attribute) load() (in module fmristroke.config) log_dir (fmristroke.config.execution attribute)

log_level (fmristroke.config.execution attribute) low_mem (fmristroke.config.execution attribute) lower_cutoff (fmristroke.config.workflow attribute)

M

maxlag (fmristroke.config.workflow attribute) memory_gb (fmristroke.config.nipype attribute) module fmristroke.config fmristroke.workflows.bold fmristroke.workflows.bold.base fmristroke.workflows.bold.concatenate fmristroke.workflows.bold.confounds fmristroke.workflows.bold.connectivity fmristroke.workflows.bold.denoise fmristroke.workflows.bold.lagmaps fmristroke.workflows.bold.registration fmristroke.workflows.final

N

ncomp_method (fmristroke.config.workflow attribute) nipype (class in fmristroke.config)

nipype_version (fmristroke.config.environment attribute) nprocs (fmristroke.config.nipype attribute)

O

omp_nthreads (fmristroke.config.nipype attribute) output_atlases (fmristroke.config.execution attribute) output_dir (fmristroke.config.execution attribute)

output_pipelines (fmristroke.config.execution attribute) output_spaces (fmristroke.config.execution attribute) overcommit_limit (fmristroke.config.environment attribute) overcommit_policy (fmristroke.config.environment attribute)

P

participant_label (fmristroke.config.execution attribute) pipelines (fmristroke.config.workflow attribute)

plugin (fmristroke.config.nipype attribute) plugin_args (fmristroke.config.nipype attribute)

R

reports_only (fmristroke.config.execution attribute) resource_monitor (fmristroke.config.nipype attribute)

run_sessionlevel (fmristroke.config.execution attribute) run_uuid (fmristroke.config.execution attribute)

S

spaces (fmristroke.config.workflow attribute)

stop_on_first_crash (fmristroke.config.nipype attribute)

T

templateflow_home (fmristroke.config.execution attribute)

templateflow_version (fmristroke.config.environment attribute) to_filename() (in module fmristroke.config)

U

upper_cutoff (fmristroke.config.workflow attribute)

V

version (fmristroke.config.environment attribute)

W

work_dir (fmristroke.config.execution attribute)

workflow (class in fmristroke.config) write_graph (fmristroke.config.execution attribute)